PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr8P32130_001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bHLH
Protein Properties Length: 422aa    MW: 45056.2 Da    PI: 9.5973
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr8P32130_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.81.4e-11353398655
                            HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                            +++Er RR ri +++ +L++++P+     +k  s +++Le+A+++Ik+Lq
  GSMUA_Achr8P32130_001 353 SIAERERRTRISKRLRKLQDIVPNM----DKQTSTSDMLELAIQHIKELQ 398
                            689*********************7....688*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.253347397IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.36E-15350409IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.58E-12351402No hitNo description
Gene3DG3DSA:4.10.280.108.2E-15352409IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.8E-9353398IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.6E-12353403IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 422 aa     Download sequence    Send to blast
MGKPFIIRRM PTLPYSSRYS LHCSRTRPLT LSLGSGPTHG IRSRSLIPSF PFYRRIKPLN  60
PSPFLTRSRT FPRGAAMNQS PSGGNKSGSM GPLEGLSRYG SAPGSFLSGL ADSAIAGGGG  120
GGGEPSAVGA GSEGMVGRFF AGESSCPTSE SGCRDSAGGV GGCLQGSYRP GDLHLSAGGS  180
LLVRHSSSPA GFFSHPLTDH GVSTTRVSAN YSQTGTDSIH ASANRRLRSQ WSFSRDSLSQ  240
ISELSIPEIG ENDTCCNSSD EAAGHAGQSY ISGNFQLGSW EDNNSIAFSA PPNKQAKDNA  300
DDMVTGLSNI ASQFSFPRTS SEMSALEKYL QVQQDSVPCR VRAKRGCATH PRSIAERERR  360
TRISKRLRKL QDIVPNMDKQ TSTSDMLELA IQHIKELQSQ VQKLKQEQAN CTCPGKQEKA  420
GE
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009414667.10.0PREDICTED: transcription factor bHLH128-like isoform X1
TrEMBLM0TVG50.0M0TVG5_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr8P32130_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP70713752
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05805.15e-60bHLH family protein